STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102685877Cytochrome P450, family 20, subfamily A, polypeptide 1. (463 aa)    
Predicted Functional Partners:
pla2g4a
Phospholipase A2.
    
 0.856
W5NNT2_LEPOC
Sulfite oxidase; Belongs to the cytochrome b5 family.
     
 0.841
aasdh
Aminoadipate-semialdehyde dehydrogenase.
  
 0.804
hsd17b7
Hydroxysteroid (17-beta) dehydrogenase 7.
    
 0.799
W5M408_LEPOC
Acetylserotonin O-methyltransferase-like.
     
 0.791
lss
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
   
 0.777
W5N9L1_LEPOC
Steroid 5 alpha-reductase 3.
     
 0.762
CYB5R4
Cytochrome b5 reductase 4.
   
 0.741
kmo
Kynurenine 3-monooxygenase; Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid.
  
 0.722
sc5d
Sterol-C5-desaturase; Belongs to the sterol desaturase family.
   
 0.702
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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