STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cttnbp2nlCTTNBP2 N-terminal like b. (567 aa)    
Predicted Functional Partners:
LOC102696336
MOB family member 4, phocein.
    
 
 0.966
pdcd10
Programmed cell death 10b.
    
 
 0.964
W5LZH3_LEPOC
Protein phosphatase 2, regulatory subunit A, beta b.
    
 
 0.924
cct5
Chaperonin containing TCP1, subunit 5 (epsilon).
    
   0.922
W5NH55_LEPOC
Chaperonin containing TCP1, subunit 2 (beta).
    
   0.922
strip1
Striatin interacting protein 1.
    
 
 0.888
strip2
Striatin interacting protein 2.
    
 
 0.888
W5MTR4_LEPOC
Striatin, calmodulin binding protein 3.
   
 
 0.860
strn4
Striatin, calmodulin binding protein 4.
   
 
 0.860
strn
Striatin, calmodulin binding protein.
   
 
 0.860
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.