STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
itm2bIntegral membrane protein 2Bb. (259 aa)    
Predicted Functional Partners:
W5MXT3_LEPOC
Amyloid beta (A4) precursor protein b.
   
 0.617
scamp1
Secretory carrier-associated membrane protein.
    
 
 0.474
W5M341_LEPOC
Guanine nucleotide binding protein (G protein), beta polypeptide 1-like.
      
 0.431
LOC102699009
Motilin receptor; Belongs to the G-protein coupled receptor 1 family.
      
 0.422
aplp2
Amyloid beta (A4) precursor-like protein 2.
   
 0.421
cdadc1
Cytidine and dCMP deaminase domain containing 1.
      
 0.414
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.