STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
batfBasic leucine zipper transcription factor, ATF-like. (122 aa)    
Predicted Functional Partners:
junb
JunB proto-oncogene, AP-1 transcription factor subunit a.
   
 0.972
batf3
Basic leucine zipper transcription factor, ATF-like 3.
   
 
0.885
jund
BZIP domain-containing protein.
   
 0.852
jun
Jun proto-oncogene, AP-1 transcription factor subunit; Belongs to the bZIP family.
   
 0.832
LOC102689161
JunE proto-oncogene, AP-1 transcription factor subunit.
   
 0.832
spc25
SPC25 component of NDC80 kinetochore complex.
    
 0.768
ndc80
NDC80 kinetochore complex component.
    
 0.739
W5N9F5_LEPOC
UF2 component of NDC80 kinetochore complex.
   
 0.699
W5N9G1_LEPOC
UF2 component of NDC80 kinetochore complex.
   
 0.699
LOC102692789
Activating transcription factor 5a.
    
 0.673
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.