STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pou1f1POU domain protein. (368 aa)    
Predicted Functional Partners:
crebbp
CREB binding protein b.
    
 0.694
W5NI40_LEPOC
Prolactin 2.
   
  
 0.675
W5MA75_LEPOC
Small nuclear RNA activating complex, polypeptide 4.
    
  0.668
W5N0P4_LEPOC
E1A binding protein p300 a.
    
 0.637
tshb
Thyroid stimulating hormone subunit beta a.
   
  
 0.631
tbp
TATA box binding protein.
   
 0.621
LOC102689425
Homeobox domain-containing protein.
    
 
 0.609
gtf2b
General transcription factor IIB.
    
  0.603
gtf2e1
General transcription factor IIE, polypeptide 1, alpha.
    
  0.597
HESX1
HESX homeobox 1.
    
 
 0.585
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.