STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aff4AF4/FMR2 family, member 4. (1162 aa)    
Predicted Functional Partners:
cdk9
Cyclin-dependent kinase 9 (CDC2-related kinase).
    
 0.990
ccnt1
Cyclin T1; Belongs to the cyclin family.
   
 0.982
ccnt2
Cyclin T2a; Belongs to the cyclin family.
   
 0.978
W5LZT0_LEPOC
Elongation factor, RNA polymerase II, 2.
   
 0.974
eaf2
ELL associated factor 2.
    
 0.973
eaf1
ELL associated factor 1.
    
 0.967
W5MEB7_LEPOC
Elongation factor RNA polymerase II.
   
 0.964
LOC102687623
Si:ch211-13k12.2.
   
 0.959
mllt1
MLLT1 super elongation complex subunit b.
    
 0.906
mllt3
MLLT3 super elongation complex subunit.
    
 0.906
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.