STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lrrc74aLeucine rich repeat containing 74A. (450 aa)    
Predicted Functional Partners:
serpind1
Serpin peptidase inhibitor, clade D (heparin cofactor), member 1; Belongs to the serpin family.
      
 0.559
fam161b
FAM161 centrosomal protein B.
      
 0.536
RANBP2
RAN binding protein 2.
   
 
  0.522
ripk4
Receptor-interacting serine-threonine kinase 4.
    
  0.489
W5MSM4_LEPOC
Protein kinase domain-containing protein.
    
  0.489
W5MDG7_LEPOC
SGT1 homolog, MIS12 kinetochore complex assembly cochaperone.
    
 0.480
rps27a
Ribosomal protein S27a.
    
  0.479
NEK6
NIMA-related kinase 6; Belongs to the protein kinase superfamily.
    
  0.451
nek7
NIMA-related kinase 7; Belongs to the protein kinase superfamily.
    
  0.451
W5LXP5_LEPOC
GB1/RHD3-type G domain-containing protein.
   
  0.441
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.