STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102697696Ribosomal protein L37. (148 aa)    
Predicted Functional Partners:
ndufaf5
NADH:ubiquinone oxidoreductase complex assembly factor 5.
     
 0.778
acad9
Acyl-CoA dehydrogenase family, member 9.
    
 0.717
acadvl
Acyl-CoA dehydrogenase very long chain.
    
 0.717
ecsit
ECSIT signalling integrator.
    
  0.660
ndufb8
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
   
  0.645
LOC102686983
Uncharacterized protein.
    
 0.642
ndufaf1
NADH:ubiquinone oxidoreductase complex assembly factor 1.
    
 0.622
W5M3U0_LEPOC
NADH:ubiquinone oxidoreductase core subunit V2.
     
 0.611
tmem186
Transmembrane protein 186.
     
 0.611
ndufb6
NADH:ubiquinone oxidoreductase subunit B.
   
 
  0.598
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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