STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rnf103Ring finger protein 103. (675 aa)    
Predicted Functional Partners:
MLKL
Mixed lineage kinase domain like pseudokinase.
    
  0.813
chmp3
Charged multivesicular body protein 3.
 
    
 0.811
rps27a
Ribosomal protein S27a.
    
 0.722
vps4a
Vacuolar protein sorting 4 homolog A; Belongs to the AAA ATPase family.
     
 0.691
vps4b
Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family.
     
 0.691
chmp4b
Charged multivesicular body protein 4Ba.
   
 
  0.687
chmp4c
Charged multivesicular body protein 4C.
   
 
  0.679
ube2k
Ubiquitin-conjugating enzyme E2Kb (UBC1 homolog, yeast); Belongs to the ubiquitin-conjugating enzyme family.
    
 0.661
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.596
W5MVF4_LEPOC
Uncharacterized protein.
    
 0.596
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.