STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5MY28_LEPOCReceptor expression-enhancing protein. (194 aa)    
Predicted Functional Partners:
reep2
Receptor expression-enhancing protein.
  
 
 
0.691
atl1
Atlastin GTPase 1.
    
 
 0.637
W5M3Q5_LEPOC
Catenin (cadherin-associated protein), alpha 2.
      
 0.621
zfyve27
Zinc finger, FYVE domain containing 27.
    
 
 0.617
SPAST
Spastin; ATP-dependent microtubule severing protein that specifically recognizes and cuts microtubules that are polyglutamylated. Preferentially recognizes and acts on microtubules decorated with short polyglutamate tails: severing activity increases as the number of glutamates per tubulin rises from one to eight, but decreases beyond this glutamylation threshold. Microtubule severing promotes reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation. Required for membrane traffic from the endoplasmic reticulum (ER) to the Go [...]
   
  
 0.569
W5NCG7_LEPOC
Reticulon.
   
 
 0.545
washc5
WASH complex subunit 5.
      
 0.544
nipa1
NIPA magnesium transporter 1.
      
 0.542
atl2
Atlastin GTPase 2.
    
 
 0.518
LOC102697332
Atlastin 3.
    
 
 0.513
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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