STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5MYL5_LEPOCSi:rp71-68n21.9. (616 aa)    
Predicted Functional Partners:
W5MLW6_LEPOC
Kelch-like ECH-associated protein 1b.
  
 
 
0.933
klhl13
Kelch-like family member 13.
  
  
 
0.931
LOC102689289
Kelch-like ECH-associated protein 1a.
  
 
 
0.893
W5MCQ1_LEPOC
Rho related BTB domain containing 4.
    
  0.878
W5MYV2_LEPOC
BTB domain-containing protein.
  
  
 
0.869
cul3
Cullin 3a; Belongs to the cullin family.
    
 0.837
klhl22
Kelch-like family member 22.
  
 
 
0.820
rhobtb1
Rho related BTB domain containing 1.
    
  0.817
rhobtb2
Rho related BTB domain containing 2a.
    
  0.817
KLHL34
Kelch like family member 34.
  
  
 
0.801
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.