STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mbtd1Mbt domain containing 1. (713 aa)    
Predicted Functional Partners:
yy1
YY1 transcription factor b.
    
 0.944
rnf2
Ring finger protein 2.
    
 0.912
LOC102698732
Si:ch211-195d17.2.
    
 0.905
W5N159_LEPOC
MAX dimerization protein MGA a.
   
 0.867
max
Myc associated factor X.
    
 0.835
W5MHE4_LEPOC
Chromobox homolog 5 (HP1 alpha homolog, Drosophila).
    
 0.827
CBX3
Chromobox homolog 3a (HP1 gamma homolog, Drosophila).
    
 0.827
W5N7D5_LEPOC
Chromobox homolog 1b (HP1 beta homolog Drosophila).
    
 0.827
yaf2
YY1 associated factor 2.
    
 0.808
rybp
RING1 and YY1 binding protein.
    
 0.808
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.