STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5MZ00_LEPOCBromodomain and PHD finger containing, 3a. (1204 aa)    
Predicted Functional Partners:
meaf6
MYST/Esa1-associated factor 6.
    
 0.969
W5MAL7_LEPOC
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
   
 0.939
W5NF02_LEPOC
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
   
 0.939
ing5
Inhibitor of growth protein.
    
 0.914
W5MJF7_LEPOC
Inhibitor of growth protein.
    
 0.901
W5NB67_LEPOC
Uncharacterized protein.
  
0.891
brd1
Bromodomain containing 1a.
  
0.891
kat7
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
   
 0.872
W5MUY9_LEPOC
Sterile alpha motif domain containing 1b.
   
 0.817
samd13
Sterile alpha motif domain containing 13.
    
 0.803
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.