STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5MZ31_LEPOCActivating transcription factor 4b. (411 aa)    
Predicted Functional Partners:
cebpb
CCAAT/enhancer-binding protein.
   
 0.979
W5NM33_LEPOC
CCAAT enhancer binding protein gamma.
   
 0.976
W5MFB9_LEPOC
DNA-damage-inducible transcript 3.
   
 0.967
W5N0P4_LEPOC
E1A binding protein p300 a.
    
 0.955
crebbp
CREB binding protein b.
    
 0.953
atf6
Activating transcription factor 6.
     
 0.938
eif2ak3
Eukaryotic translation initiation factor 2-alpha kinase 3.
     
 0.937
eif2s1
Eukaryotic translation initiation factor 2, subunit 1 alpha a.
     
 0.937
CREM
cAMP responsive element modulator.
    
 0.925
creb1
cAMP responsive element binding protein 1b.
    
 0.925
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.