STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5MZH2_LEPOCSi:dkey-30e9.7. (1940 aa)    
Predicted Functional Partners:
rbpj
Recombination signal binding protein for immunoglobulin kappa J region b.
    
 0.625
NCSTN
Nicastrin.
    
 0.606
rbpjl
Recombination signal binding protein for immunoglobulin kappa J region-like.
    
 0.571
numb
NUMB endocytic adaptor protein.
    
 0.534
W5NB42_LEPOC
PID domain-containing protein.
    
 0.534
mst1r
Macrophage stimulating 1 receptor b.
    
  0.528
met
MET proto-oncogene, receptor tyrosine kinase.
    
  0.528
ptk7
Protein tyrosine kinase 7a; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
  0.522
LOC102693167
Beta-1,3-N-acetylglucosaminyltransferase.
    
  0.514
LOC102690142
MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase.
    
  0.514
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.