STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5MZH9_LEPOCKinectin 1. (1302 aa)    
Predicted Functional Partners:
ak9
Adenylate kinase 9.
    
  0.890
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.863
RANBP2
RAN binding protein 2.
    
 0.778
LOC102690743
Ras homolog gene family, member Gc.
    
 0.735
rhog
Ras homolog family member Gb.
    
 0.735
RIMS2
Regulating synaptic membrane exocytosis 2.
    
  0.711
cdc42
Cell division cycle 42.
    
 0.698
W5MPR4_LEPOC
Eukaryotic translation elongation factor 1 delta b (guanine nucleotide exchange protein); Belongs to the EF-1-beta/EF-1-delta family.
    
 
 0.693
rnd2
Rho family GTPase 2.
    
  0.690
rnd3
Rho family GTPase 3b.
   
  0.652
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.