STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5MZK7_LEPOCValosin containing protein lysine (K) methyltransferase. (232 aa)    
Predicted Functional Partners:
vcp
Valosin containing protein; Belongs to the AAA ATPase family.
   
 0.972
LOC102686545
Zgc:136908; Belongs to the AAA ATPase family.
   
 0.972
SPATA5
Spermatogenesis associated 5.
   
 0.862
spata5l1
Spermatogenesis associated 5-like 1.
   
 0.862
ubxn6
UBX domain protein 6.
    
 
 0.746
etfb
Electron transfer flavoprotein subunit beta.
     
 0.618
eef2kmt
Eukaryotic elongation factor 2 lysine methyltransferase.
   
 
 0.570
METTL18
Methyltransferase like 18.
   
  
 0.564
W5LYQ7_LEPOC
Zgc:171967; Belongs to the glycosyl hydrolase 31 family.
    
  0.541
etfbkmt
Electron transfer flavoprotein subunit beta lysine methyltransferase.
      
 0.535
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.