STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5MZM6_LEPOCUncharacterized protein. (3682 aa)    
Predicted Functional Partners:
fjx1
Four-jointed box kinase 1.
   
  0.541
fat2
FAT atypical cadherin 2.
    
 
0.493
fat1
FAT atypical cadherin 1a.
    
 
0.493
LOC102695806
Junction plakoglobin b.
    
 0.464
ctnnb1
Catenin (cadherin-associated protein), beta 1.
    
  0.461
uckl1
Uridine-cytidine kinase; Belongs to the uridine kinase family.
    
  0.461
uck2
Uridine-cytidine kinase; Belongs to the uridine kinase family.
    
  0.461
uck1
Uridine-cytidine kinase; Belongs to the uridine kinase family.
    
  0.461
LOC102698802
Uridine-cytidine kinase; Belongs to the uridine kinase family.
    
  0.461
lhfpl2
LHFPL tetraspan subfamily member 2b.
    
  0.458
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.