STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102692742STRA6-like. (662 aa)    
Predicted Functional Partners:
psmd11
Proteasome 26S subunit, non-ATPase 11b.
    
  0.666
W5MRH9_LEPOC
Proteasome 26S subunit, ATPase 1a; Belongs to the AAA ATPase family.
   
  0.644
psmc5
Proteasome 26S subunit, ATPase 5; Belongs to the AAA ATPase family.
   
  0.644
psma4
Proteasome subunit alpha type.
    
  0.624
psmb1
Proteasome subunit beta.
    
  0.624
gak
Cyclin G associated kinase.
   
 0.604
tubgcp4
Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome; Belongs to the TUBGCP family.
    
  0.601
psma2
Proteasome subunit alpha type.
    
  0.580
W5N2R2_LEPOC
Enoyl-CoA delta isomerase 2.
    
  0.573
W5M6P3_LEPOC
WD repeat domain 90.
    
  0.569
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.