STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
uchl3Ubiquitin carboxyl-terminal hydrolase. (230 aa)    
Predicted Functional Partners:
rps27a
Ribosomal protein S27a.
    
 0.968
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.957
psmd14
Proteasome 26S subunit, non-ATPase 14.
   
 0.850
W5MVF4_LEPOC
Uncharacterized protein.
    
  0.848
uba3
Ubiquitin-like modifier activating enzyme 3.
   
 0.818
W5NN54_LEPOC
SUMO peptidase family member, NEDD8 specific.
    
 0.777
GNAZ
G protein subunit alpha z.
    
 0.761
gna12
Guanine nucleotide binding protein (G protein) alpha 12a.
    
 0.761
GNAO1
Guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, b.
    
 0.761
gnai2
Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2b.
    
 0.761
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.