STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ltc4sLeukotriene C4 synthase. (149 aa)    
Predicted Functional Partners:
lta4h
Leukotriene A(4) hydrolase; Belongs to the peptidase M1 family.
     
 0.904
ggt1
Gamma-glutamyltransferase 1a.
     
 0.862
gsto1
Glutathione S-transferase omega 2.
     
 0.835
W5MW99_LEPOC
Thioredoxin domain-containing protein.
   
 
 0.800
gss
Glutathione synthetase.
   
 
 0.798
ggt5
Uncharacterized protein.
     
 0.792
LOC102683880
Uncharacterized protein.
     
 0.792
gsr
Glutathione reductase; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
     
 0.792
mgst1
Microsomal glutathione S-transferase 1.1.
    
 0.763
ptges
Prostaglandin E synthase.
    
 0.724
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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