STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5N0D4_LEPOCPhospholipase A2, group VI (cytosolic, calcium-independent). (638 aa)    
Predicted Functional Partners:
pla2g4a
Phospholipase A2.
     
 0.929
pla2g10
Phospholipase A(2).
   
 
 0.901
ptgs2
Prostaglandin-endoperoxide synthase 2b.
   
 0.888
pla2g7
Platelet-activating factor acetylhydrolase.
     
 0.884
LOC102696699
Cytochrome P450, family 2, subfamily U, polypeptide 1; Belongs to the cytochrome P450 family.
     
 0.882
PTGS1
Prostaglandin-endoperoxide synthase 1.
   
 0.875
lpcat2
Lysophosphatidylcholine acyltransferase 2.
     
 0.867
lpcat1
Lysophosphatidylcholine acyltransferase 1.
     
 0.867
pla2g12a
Phospholipase A2, group XIIA.
     
 0.866
W5LZ25_LEPOC
Glycerophosphodiester phosphodiesterase domain containing 1.
     
 0.862
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.