STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plcd3Phosphoinositide phospholipase C. (778 aa)    
Predicted Functional Partners:
dgkz
Diacylglycerol kinase.
   
 0.893
W5NKI8_LEPOC
Diacylglycerol kinase.
   
 0.889
W5M8S0_LEPOC
Phosphatidylinositol-5-phosphate 4-kinase, type II, gamma b.
   
 0.887
pip4k2a
Phosphatidylinositol-5-phosphate 4-kinase, type II, alpha b.
   
 0.887
PIP4K2B
Phosphatidylinositol-5-phosphate 4-kinase type 2 beta.
   
 0.887
W5MAJ9_LEPOC
Phosphatidylinositol-4-phosphate 5-kinase, type I, gamma a.
   
 0.886
pip5kl1
Phosphatidylinositol-4-phosphate 5-kinase-like 1.
    
 0.883
ipmk
Kinase; Belongs to the inositol phosphokinase (IPK) family.
    
 0.883
pip5k1a
Phosphatidylinositol-4-phosphate 5-kinase, type I, alpha, b.
   
 0.883
pip5k1b
Phosphatidylinositol-4-phosphate 5-kinase, type I, beta b.
   
 0.883
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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