STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5N0U7_LEPOCUncharacterized protein. (677 aa)    
Predicted Functional Partners:
W5MPJ7_LEPOC
Regulatory factor X, 5.
    
 0.551
LOC102696607
Adhesion G protein-coupled receptor G1.
   
 0.529
W5MWM5_LEPOC
Receptor-interacting serine-threonine kinase 2.
   
 0.529
RANBP2
RAN binding protein 2.
   
 
  0.522
W5MBX3_LEPOC
PYD and CARD domain containing.
   
 0.515
LOC102686244
PYD and CARD domain containing.
   
 0.515
W5MBF3_LEPOC
Regulatory factor X-associated ankyrin-containing protein.
    
 0.514
W5MDG7_LEPOC
SGT1 homolog, MIS12 kinetochore complex assembly cochaperone.
    
 0.513
bcl2
BCL2 apoptosis regulator b.
    
 0.512
rps27a
Ribosomal protein S27a.
    
  0.499
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.