STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tra2aTransformer 2 alpha homolog. (291 aa)    
Predicted Functional Partners:
srsf3
Serine and arginine rich splicing factor 3a.
   
 0.981
srsf1
Serine and arginine rich splicing factor 1b.
   
 0.977
srsf2
Serine and arginine rich splicing factor 2a.
  
0.953
SRSF10
Serine and arginine rich splicing factor 10.
   
0.937
srsf9
Serine and arginine rich splicing factor 9.
   
 0.927
LOC102687476
Serine and arginine rich splicing factor 7a.
   
 0.921
srsf7
Serine and arginine rich splicing factor 7b.
   
 0.921
srsf6
Uncharacterized protein.
  
 0.855
W5M9G1_LEPOC
Uncharacterized protein.
   
 0.823
hnrnpk
Heterogeneous nuclear ribonucleoprotein K, like.
   
 0.816
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.