STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mpp6Uncharacterized protein; Belongs to the MAGUK family. (551 aa)    
Predicted Functional Partners:
ak9
Adenylate kinase 9.
   
 0.881
LOC102698183
Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family.
    
 0.873
lin7a
Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family.
    
 0.873
LOC102686089
Amyloid beta precursor protein binding family A member 3.
    
 0.832
apba1
Amyloid beta (A4) precursor protein-binding, family A, member 1a.
    
 0.832
W5N8C2_LEPOC
Amyloid beta (A4) precursor protein-binding, family A, member 2b.
    
 0.832
CAMK2A
Calcium/calmodulin dependent protein kinase II alpha; Belongs to the protein kinase superfamily.
 
  
  0.830
camk2d
Calcium/calmodulin-dependent protein kinase (CaM kinase) II delta 1.
 
  
  0.763
W5M185_LEPOC
Whirlin a.
    
 0.749
W5NJ40_LEPOC
Epoxide hydrolase 2, cytoplasmic.
    
  0.709
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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