STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5N159_LEPOCMAX dimerization protein MGA a. (2951 aa)    
Predicted Functional Partners:
max
Myc associated factor X.
    
 0.960
LOC102698732
Si:ch211-195d17.2.
    
 0.930
mbtd1
Mbt domain containing 1.
   
 0.867
W5N0R2_LEPOC
FCS-type domain-containing protein.
   
 0.867
yaf2
YY1 associated factor 2.
    
 0.835
rybp
RING1 and YY1 binding protein.
    
 0.835
pcgf1
Polycomb group ring finger 1.
    
 0.832
pcgf6
Polycomb group ring finger 6.
    
 0.832
rnf2
Ring finger protein 2.
    
  0.830
W5MCA8_LEPOC
Nucleolar protein 6.
   
    0.777
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.