STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lgals3Galectin. (292 aa)    
Predicted Functional Partners:
lamp1
Lysosomal associated membrane protein 1a.
    
 0.514
W5M9Z6_LEPOC
Uncharacterized protein.
   
 
 0.510
W5LZK3_LEPOC
Link domain-containing protein.
   
 
 0.493
gemin4
Gem (nuclear organelle) associated protein 4.
    
 
 0.479
PTPRC
Protein tyrosine phosphatase receptor type C.
    
 
 0.474
W5MNZ1_LEPOC
SEA domain-containing protein.
      
 0.469
LOC102694942
TYRO3 protein tyrosine kinase.
   
 
 0.464
LOC102685166
Uncharacterized protein.
    
 0.456
W5M7V9_LEPOC
Uncharacterized protein.
   
  
 0.428
lgals3bp
Uncharacterized protein.
    
 0.421
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.