STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gfapGlial fibrillary acidic protein; Belongs to the intermediate filament family. (447 aa)    
Predicted Functional Partners:
ahrr
Aryl-hydrocarbon receptor repressor b.
    
 
 0.594
LOC102685351
Barrier to autointegration factor 1.
    
 0.593
W5NM53_LEPOC
Uncharacterized protein.
    
 0.593
LOC102688903
Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
   
  
 0.559
W5MHR8_LEPOC
RNA binding motif protein 39a.
    
 0.546
W5NGZ4_LEPOC
LEM domain containing 3.
    
 0.546
olig2
Oligodendrocyte lineage transcription factor 2.
   
  
 0.511
elavl3
ELAV-like protein; Belongs to the RRM elav family.
   
  
 0.498
tcap
Titin-cap (telethonin).
   
 
  0.477
W5LYM1_LEPOC
Si:dkey-92f12.2.
    
 0.476
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.