STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102696526Myosin_tail_1 domain-containing protein. (1141 aa)    
Predicted Functional Partners:
W5LV58_LEPOC
Myosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
 
  
  0.912
W5LY49_LEPOC
Myosin heavy chain 6; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
 
      0.899
myl1
Myosin, light polypeptide 3, skeletal muscle.
   
 0.878
myh11
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
 
      0.825
MYL6B
Myosin light chain 6B.
   
 0.818
LOC102694319
Myosin, light chain 9a, regulatory.
   
 0.778
LOC102691547
Myosin, light chain 12, genome duplicate 1.
   
 0.778
myl7
Myosin, light chain 7, regulatory.
   
 0.770
MYLPF
Myosin light chain, phosphorylatable, fast skeletal muscle.
   
 0.711
myl3
Myosin, light chain 13.
   
 0.652
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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