STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dcaf7Ddb1 and cul4 associated factor 7. (356 aa)    
Predicted Functional Partners:
LOC102684036
Dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B.
   
 
 0.946
dyrk1a
Dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A, b.
   
 
 0.946
W5LV61_LEPOC
Damage-specific DNA binding protein 1.
    
 0.915
W5MM08_LEPOC
Excision repair cross-complementation group 8.
     
 0.845
cul4a
Cullin 4A; Belongs to the cullin family.
    
 0.826
cul4b
Cullin 4B; Belongs to the cullin family.
    
 0.826
dtl
Denticleless E3 ubiquitin protein ligase homolog (Drosophila).
     
 0.798
W5NIX2_LEPOC
Dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 4.
   
 
 0.784
hipk3
Homeodomain interacting protein kinase 3b.
   
 
 0.770
W5MWY2_LEPOC
Homeodomain interacting protein kinase 1a.
   
 
 0.770
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.