STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
faf2Fas associated factor family member 2. (449 aa)    
Predicted Functional Partners:
ubac2
UBA domain containing 2.
    
 
 0.973
ubxn7
UBX domain protein 7.
    
 
 0.973
ufd1
Ubiquitin recognition factor in ER associated degradation 1.
    
 
 0.972
vcp
Valosin containing protein; Belongs to the AAA ATPase family.
   
 0.972
LOC102686545
Zgc:136908; Belongs to the AAA ATPase family.
   
 0.972
ubxn6
UBX domain protein 6.
    
 0.881
plaa
Phospholipase A2-activating protein.
   
 
 0.864
faap100
Si:dkey-57h18.1.
    
 
 0.864
nploc4
NPL4 homolog, ubiquitin recognition factor.
    
 
 0.864
ASPSCR1
ASPSCR1 tether for SLC2A4, UBX domain containing.
    
 0.852
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.