STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102686334Sortilin related VPS10 domain containing receptor 3. (1279 aa)    
Predicted Functional Partners:
gak
Cyclin G associated kinase.
     
 0.976
sort1
Sortilin.
    
0.776
LOC102687967
Sortilin.
    
0.730
LOC102692225
Neurotrophin receptor associated death domain.
    
 0.728
W5N1J9_LEPOC
Golgi-associated, gamma adaptin ear containing, ARF binding protein 1.
    
 
 0.700
vps35
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
    
 
 0.682
psma1
Proteasome subunit alpha type.
    
   0.633
psma4
Proteasome subunit alpha type.
    
   0.633
psmb1
Proteasome subunit beta.
    
   0.633
NTF4
Neurotrophin 4; Belongs to the NGF-beta family.
    
 
 0.630
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.