STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5N2A4_LEPOCNeurofascin homolog (chicken) a. (1377 aa)    
Predicted Functional Partners:
cntn1
Contactin 1b.
    
0.948
cntnap1
Contactin associated protein 1.
   
 0.931
cntn2
Contactin 2.
   
0.855
ptprg
Protein tyrosine phosphatase receptor type Ga.
    
 
 0.795
cntn5
Contactin 5.
    
0.767
LOC102693751
Contactin 4.
    
0.767
W5MUH2_LEPOC
Uncharacterized protein.
    
0.767
LOC102694086
Contactin 3b.
    
0.767
nrp1
Neuropilin; Belongs to the neuropilin family.
    
 0.755
gypc
Glycophorin C (Gerbich blood group).
   
 0.601
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.