STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nrapNebulin-related anchoring protein. (1788 aa)    
Predicted Functional Partners:
W5N494_LEPOC
Myozenin 2b.
   
  
 0.700
csrp3
Cysteine and glycine-rich protein 3 (cardiac LIM protein).
   
 
 0.689
LMOD2
Leiomodin 2.
   
 0.650
LMOD3
Leiomodin 3.
   
 0.630
LOC102693222
Actinin, alpha 1.
   
 0.605
W5NAI1_LEPOC
Actinin, alpha 4.
   
 0.605
ACTN2
Actinin, alpha 2b.
   
 0.605
W5M0C7_LEPOC
Actinin alpha 3a.
   
 0.601
tnni2
Troponin I type 2a (skeletal, fast), tandem duplicate 4.
   
 0.597
myl1
Myosin, light polypeptide 3, skeletal muscle.
   
 
  0.596
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.