STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC1026852475-hydroxytryptamine receptor 4; Belongs to the G-protein coupled receptor 1 family. (389 aa)    
Predicted Functional Partners:
gnal
Uncharacterized protein.
    
 0.928
W5NMQ4_LEPOC
Uncharacterized protein.
    
 0.878
pomc
Proopiomelanocortin b.
    
 0.836
W5MYS6_LEPOC
Adenylate cyclase activating polypeptide 1a.
    
 0.822
vip
Vasoactive intestinal peptide.
   
 
 0.793
tshb
Thyroid stimulating hormone subunit beta a.
   
 
 0.786
W5LZ17_LEPOC
Guanine nucleotide binding protein (G protein), beta polypeptide 4b.
    
  0.739
gnb1
Guanine nucleotide binding protein (G protein), beta polypeptide 1b.
    
  0.739
gnb3
Guanine nucleotide binding protein (G protein), beta polypeptide 3a.
    
  0.739
W5N7N1_LEPOC
Guanine nucleotide binding protein (G protein), beta polypeptide 2.
    
  0.739
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.