Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
actc1Zgc:86709. (381 aa)    
Predicted Functional Partners:
LOC102688628
Actin alpha cardiac muscle 1c.
  
 
 
0.980
LOC102689871
Actin alpha 1, skeletal muscle b.
  
 
 
0.979
tpm4
Tropomyosin 4a; Belongs to the tropomyosin family.
   
 0.942
LOC102683847
Uncharacterized protein; Belongs to the tropomyosin family.
   
 0.942
W5LY49_LEPOC
Myosin heavy chain 6; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.940
W5LYA0_LEPOC
Myosin heavy chain 7-like; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.940
W5LY26_LEPOC
Troponin T2e, cardiac.
   
 0.937
myl3
Myosin, light chain 13.
   
 0.929
myl4
Myosin, light chain 4, alkali; atrial, embryonic.
   
 0.929
myl2
Myosin, light chain 2a, regulatory, cardiac, slow.
   
 0.920
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.