STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF138Ring finger protein 138. (239 aa)    
Predicted Functional Partners:
W5MJC8_LEPOC
Hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase).
  
 
 0.922
cs
Citrate synthase; Belongs to the citrate synthase family.
  
 0.915
CYB5R4
Cytochrome b5 reductase 4.
  
 
 0.887
suclg1
Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and specificity for either ATP or GTP is provided by different beta subunits.
  
 0.855
W5MSQ5_LEPOC
Succinate dehydrogenase complex, subunit A, flavoprotein (Fp).
  
 0.815
W5MM14_LEPOC
Si:dkey-31b16.7.
  
 0.809
W5NJE8_LEPOC
HGTP_anticodon domain-containing protein.
    
 0.805
W5M225_LEPOC
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.777
LOC102683593
Zgc:113208.
  
 0.775
fh
Fumarate hydratase.
  
 0.775
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.