STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aqrAquarius intron-binding spliceosomal factor. (1463 aa)    
Predicted Functional Partners:
W5MNA9_LEPOC
Pre-mRNA processing factor 19.
    
 0.999
crnkl1
Crooked neck pre-mRNA splicing factor 1.
    
 0.999
W5M1E5_LEPOC
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
 0.998
bud31
BUD31 homolog.
    
  0.998
W5MQR5_LEPOC
SNW domain containing 1.
    
  0.998
rbm22
RNA binding motif protein 22.
    
 0.998
isy1
ISY1 splicing factor homolog.
 
  
 0.998
ZNF830
Zinc finger protein 830.
    
 0.996
eftud2
Elongation factor Tu GTP binding domain containing 2.
   
 
 0.992
cdc5l
CDC5 cell division cycle 5-like (S. pombe).
   
 
 0.990
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.