STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mttpMicrosomal triglyceride transfer protein. (889 aa)    
Predicted Functional Partners:
apob
Apolipoprotein Bb, tandem duplicate 1.
   
 0.977
pdia2
Protein disulfide-isomerase.
    
 0.861
W5N925_LEPOC
Protein disulfide-isomerase.
    
 0.861
W5MPP0_LEPOC
Uncharacterized protein.
   
 0.807
W5MPP9_LEPOC
DUF1944 domain-containing protein.
   
 0.807
W5MPR3_LEPOC
VWFD domain-containing protein.
   
 0.807
W5MVE2_LEPOC
Uncharacterized protein.
   
 0.807
W5MVK7_LEPOC
Vitellogenin 5.
   
0.807
W5MGS0_LEPOC
Zgc:136472.
    
 0.694
W5MK62_LEPOC
Protein disulfide isomerase family A, member 7; Belongs to the protein disulfide isomerase family.
    
 0.694
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.