STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sypl2Synaptophysin-like 2a. (265 aa)    
Predicted Functional Partners:
nans
N-acetylneuraminic acid synthase a.
     
 0.596
W5MJL8_LEPOC
V-SNARE coiled-coil homology domain-containing protein.
   
 0.586
vamp1
V-SNARE coiled-coil homology domain-containing protein.
   
 0.586
VAMP2
Vesicle associated membrane protein 2.
   
 0.586
hexb
Beta-hexosaminidase.
   
 
  0.580
gne
Glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase.
     
 0.579
W5M3Z5_LEPOC
Vesicle-associated membrane protein 3 (cellubrevin).
    
 0.540
W5LZI6_LEPOC
N-acetylglucosamine kinase.
     
 0.514
m1ap
Meiosis 1 associated protein.
     
 0.514
npl
N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase); Belongs to the DapA family.
   
 
  0.507
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.