STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5N3J1_LEPOCGuanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2. (332 aa)    
Predicted Functional Partners:
pde6g
Phosphodiesterase 6G, cGMP-specific, rod, gamma, paralog b.
   
 0.991
LOC102694494
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
   
 0.990
gnb1
Guanine nucleotide binding protein (G protein), beta polypeptide 1b.
   
 0.988
gnb3
Guanine nucleotide binding protein (G protein), beta polypeptide 3a.
   
 0.966
LOC102690995
Rhodopsin.
   
 0.966
gnat1
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1.
  
 
 
0.951
LOC102689797
Phosphodiesterase.
   
 0.951
pde6b
Phosphodiesterase.
   
 0.947
RHO
Rhodopsin.
   
 0.943
LOC102698275
Rhodopsin.
   
 0.943
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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