STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rars1Arginyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (660 aa)    
Predicted Functional Partners:
W5LW97_LEPOC
tRNA-synt_1g domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.999
W5MFE5_LEPOC
Uncharacterized protein.
  
 0.999
W5NJE8_LEPOC
HGTP_anticodon domain-containing protein.
  
 0.999
yars1
Tyrosine--tRNA ligase.
  
 0.996
qars1
Glutaminyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.995
iars1
Isoleucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.992
W5MWP8_LEPOC
Leucyl-tRNA synthetase b; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
 0.991
aimp1
Aminoacyl tRNA synthetase complex interacting multifunctional protein 1a.
  
 0.989
W5MPL2_LEPOC
Aminoacyl tRNA synthetase complex interacting multifunctional protein 2.
   
 0.981
eef1e1
Eukaryotic translation elongation factor 1 epsilon 1.
   
 0.961
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.