STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sgcdSarcoglycan, delta (dystrophin-associated glycoprotein). (334 aa)    
Predicted Functional Partners:
sgca
Sarcoglycan, alpha.
   
 0.778
W5MYB8_LEPOC
Sarcoglycan, epsilon.
   
 0.744
dag1
Dystroglycan 1.
    
 0.729
W5NDW5_LEPOC
Peptidase S72 domain-containing protein.
    
 0.729
sgcg
Sarcoglycan, gamma.
  
 
0.697
sspn
Sarcospan (Kras oncogene-associated gene).
   
 0.670
sntg1
Syntrophin, gamma 1.
   
 
 0.647
sntg2
Syntrophin, gamma 2.
   
 
 0.647
SNTA1
Syntrophin alpha 1.
     
 0.601
sntb2
Syntrophin, beta 2.
     
 0.601
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.