STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5N3U1_LEPOCGlutaredoxin and cysteine rich domain containing 1 a. (286 aa)    
Predicted Functional Partners:
cap1
Adenylyl cyclase-associated protein; Belongs to the CAP family.
    
   0.870
W5MGU4_LEPOC
Adenylyl cyclase-associated protein; Belongs to the CAP family.
    
   0.870
W5MGR8_LEPOC
CAP_N domain-containing protein.
    
   0.788
W5N412_LEPOC
Solute carrier family 30 member 9.
      
 0.666
GRXCR2
Glutaredoxin and cysteine rich domain containing 2.
     
0.643
myo1c
Myosin Ic, paralog b; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
     
 0.621
fscn1
Fascin.
     
 0.577
fscn2
Fascin.
     
 0.577
ctnna1
Catenin (cadherin-associated protein), alpha 1.
      
 0.566
PANK3
Pantothenate kinase 3.
      
 0.566
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.