STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5N3Y4_LEPOCCoA synthase. (397 aa)    
Predicted Functional Partners:
W5MIG3_LEPOC
Uncharacterized protein.
 
  
 0.995
W5N3X4_LEPOC
MAX dimerization protein MLX.
 
 
 
  0.970
ppcs
Phosphopantothenoylcysteine synthetase.
  
 0.964
LOC102690143
Cytochrome c oxidase assembly factor COX19.
  
 0.962
ppcdc
Phosphopantothenoylcysteine decarboxylase.
  
 0.962
pank4
Pantothenate kinase 4; Belongs to the type II pantothenate kinase family.
    
 0.950
pank1
Pantothenate kinase 1b.
    
 0.942
gas8
Growth arrest-specific 8.
    
 0.942
PANK2
Pantothenate kinase 2.
    
 0.942
PANK3
Pantothenate kinase 3.
    
 0.942
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.