STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5N3Y9_LEPOCDEP domain-containing protein. (252 aa)    
Predicted Functional Partners:
gnb5
Guanine nucleotide binding protein (G protein), beta 5b.
   
 0.938
LOC102695705
Regulator of G protein signaling 9b.
 
      0.900
pde6g
Phosphodiesterase 6G, cGMP-specific, rod, gamma, paralog b.
    
 0.855
gnat1
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1.
   
 0.845
W5N3J1_LEPOC
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2.
   
 0.845
cct5
Chaperonin containing TCP1, subunit 5 (epsilon).
    
  0.825
gsk3b
Glycogen synthase kinase 3 beta, genome duplicate b; Belongs to the protein kinase superfamily.
    
 0.790
W5LZ17_LEPOC
Guanine nucleotide binding protein (G protein), beta polypeptide 4b.
   
 0.783
gnb1
Guanine nucleotide binding protein (G protein), beta polypeptide 1b.
   
 0.783
gnb3
Guanine nucleotide binding protein (G protein), beta polypeptide 3a.
   
 0.783
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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