STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC39A11Solute carrier family 39 member 11. (339 aa)    
Predicted Functional Partners:
pole
DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.
 
   
  0.715
mrpl24
Mitochondrial ribosomal protein L24.
 
      0.693
slc30a4
Solute carrier family 30 member 4.
   
 0.639
slc30a7
Solute carrier family 30 member 7.
   
 0.630
W5N412_LEPOC
Solute carrier family 30 member 9.
     
 0.624
SLC39A1
Solute carrier family 39 member 1.
   
 
 0.611
LOC102697730
Uncharacterized protein.
   
 
 0.611
slc30a6
Solute carrier family 30 member 6.
   
 0.609
SLC39A13
Solute carrier family 39 member 13.
      
 0.541
slc30a5
Solute carrier family 30 member 5.
   
 0.502
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.