STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSRC1Proline and serine rich coiled-coil 1. (349 aa)    
Predicted Functional Partners:
sort1
Sortilin.
      
 0.559
ddias
Uncharacterized protein.
   
  
 0.543
LOC102692515
Uncharacterized protein.
   
  
 0.543
rnf216
Ring finger protein 216.
      
 0.513
W5MFS7_LEPOC
Cell division cycle associated 8.
   
  
 0.463
W5N037_LEPOC
Uncharacterized protein.
   
  
 0.449
ncapd2
Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases.
   
  
 0.422
ckap5
Cytoskeleton associated protein 5.
      
 0.422
LOC102687967
Sortilin.
      
 0.408
cdca2
PP1-binding domain-containing protein.
   
  
 0.401
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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