STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5N4H4_LEPOCRho guanine nucleotide exchange factor (GEF) 38. (771 aa)    
Predicted Functional Partners:
bin2
Bridging integrator 2a.
    
 
 0.830
W5MYA0_LEPOC
Bridging integrator 1b.
    
 
 0.830
W5N006_LEPOC
Amphiphysin.
    
 
 0.830
cdc42
Cell division cycle 42.
    
 0.735
LOC102698253
Cell division cycle 42, like.
    
 0.701
rac1
Rac family small GTPase 1b.
    
 0.666
rhoj
Ras homolog family member J.
    
 0.666
rhov
Ras homolog family member V.
    
 0.666
RAC3
Rac family small GTPase 3.
    
 0.666
W5NCH2_LEPOC
Ras homolog family member Ub.
    
 0.666
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.